Code for LOLCAT Method (Variant of Gillespie Algorithm)

Beal, Jacob; Indurkhya, Sagar

Author(s)

Beal, Jacob; Indurkhya, Sagar

Downloadlolcat_code.tgz (41.66Mb)

Other Contributors

Mathematics and Computation

Advisor

Gerald Sussman

Terms of use

Creative Commons Attrbution 3.0 Unported http://creativecommons.org/licenses/by/3.0/

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Abstract

This code and data is publicly listed code for the LOLCAT Method developed by Sagar Indurkhya and Jacob Beal, in the paper: "Reaction factoring and bipartite update graphs accelerate the Gillespie algorithm for large-scale biochemical systems."

Date issued

2009-09-04

URI

http://hdl.handle.net/1721.1/46710

Keywords

Computational Systems Biology, Gillespie Algorithm, Stochastic Simulation Algorithm, Bioinformatics

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